BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A12SP1|AL429159
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1180 1790 0.0
>3x_Contig1180
Length = 4625
Score = 1790 bits (891), Expect = 0.0
Identities = 952/981 (97%), Gaps = 3/981 (0%)
Strand = Plus / Minus
Query: 3 acgctcgcacaaaaatacaattgtgggttcataakaaaaratatgataataaaagtggcg 62
||||||||||||| |||||||||||||||||| |||| || |||||||| ||||||||
Sbjct: 3080 acgctcgcacaaagatacaattgtgggttcatcccaaaagatctgataatacaagtggcg 3021
Query: 63 gaag-ttatatmgataaaaaaaggaatgaagggmtdgagcggttgatgttgggaaamtct 121
| || |||||| ||||||||||||||||||||| | |||||||||||||||||||| |||
Sbjct: 3020 gcagcttatatcgataaaaaaaggaatgaagggctggagcggttgatgttgggaaactct 2961
Query: 122 tctcgtctctacaagtttaaaggtttagtttgtggatamttgttcaatattaamgttttc 181
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 2960 tctcgtctctacaagtttaaaggtttagtttgtggatacttgttcaatattaacgttttc 2901
Query: 182 atgaaattcctcaatmatcaacaaagtgtatttgaaatattcaatgamaatmaaacctag 241
||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 2900 atgaaattcctcaatcatcaacaaagtgtatttgaaatattcaatgacaatcaaacctag 2841
Query: 242 gatattaatgggaaagaaagagagagtctaaacttttagaggaagctgttggactcgaaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2840 gatattaatgggaaagaaagagagagtctaaacttttagaggaagctgttggactcgaaa 2781
Query: 302 ttagaaactcaacaaatacaagcactaamatgamaactcaagaggaggcaattgaaagga 361
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 2780 ttagaaactcaacaaatacaagcactaacatgacaactcaagaggaggcaattgaaagga 2721
Query: 362 gamtctcattatattccttcaacaaggttttcccaaactatttatmacatctacaamaga 421
|| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 2720 gactctcattatattccttcaacaaggttttcccaaactatttatcacatctacaacaga 2661
Query: 422 tcmaatcgttggttcatcgattattgaaccagaagttgaccgagaacgacaagctaagcg 481
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2660 tccaatcgttggttcatcgattattgaaccagaagttgaccgagaacgacaagctaagcg 2601
Query: 482 tagaagagataagaaaattgagagaagtattagatgacaaataccttgaagccaagaatt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2600 tagaagagataagaaaattgagagaagtattagatgacaaataccttgaagccaagaatt 2541
Query: 542 ttgtggaaacagaaagatctagttacaatgcattggatatcagtttagaacgtactgttg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2540 ttgtggaaacagaaagatctagttacaatgcattggatatcagtttagaacgtactgttg 2481
Query: 602 ataatatcaaaaacggccttgacggacaattgtcagtagtacgaaacctaagagatgagt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2480 ataatatcaaaaacggccttgacggacaattgtcagtagtacgaaacctaagagatgagt 2421
Query: 662 tgaatgagagaaatgatagacttaatcaaatgcatttggatatcacggcttttaatgagg 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2420 tgaatgagagaaatgatagacttaatcaaatgcatttggatatcacggcttttaatgagg 2361
Query: 722 agtctgtgaatctgaatacccaacctaccatcatgaggtataccaaggaagaatggatta 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2360 agtctgtgaatctgaatacccaacctaccatcatgaggtataccaaggaagaatggatta 2301
Query: 782 atattttgaatgagcctaaagcgttcgataagctactggagcatagggtatttaaaaatg 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2300 atattttgaatgagcctaaagcgttcgataagctactggagcatagggtatttaaaaatg 2241
Query: 842 ttggagacggtttatattccgttacggaagaactatttgacggggaactggagttgaaac 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2240 ttggagacggtttatattccgttacggaagaactatttgacggggaactggagttgaaac 2181
Query: 902 gtatgawtgawataatgaagaaagatattgagaggct-aatatcgaccttgatgaatata 960
|||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2180 gtatgaatgaaataatgaagaaagatattgagaggctaaatatcgaccttgatgaatata 2121
Query: 961 aa-maaaatggctagacagct 980
|| |||||||||||||||||
Sbjct: 2120 aacaaaaatggctagacagct 2100
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7493
Number of Sequences: 1807
Number of extensions: 7493
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)